Publications
- P. Lodowski, M. Jaworska, K. Kornobis, T. Andruniów, P. M. Kozlowski, Electronic and Structural Properties of Low-Lying Excited States of Vitamin B12, J. Phys. Chem. B 115 (45), 13304-13319 (2011) DOI
- K. Kornobis, N. Kumar, B. M. Wong, P. Lodowski, M. Jaworska, T. Andruniów, K. Ruud, P. M. Kozlowski, Electronically Excited States of Vitamin B12: Benchmark Calculations Including Time-dependent Density Functional Theory and Correlated ab Initio Methods, J. Phys. Chem. A 115 (7), 1280-1292 (2011) DOI
- I. Schapiro, M. R. Ryazantsev, W. J. Ding, M. M. Huntress, F. Melaccio, T. Andruniów, M. Olivucci, Computational Photobiology and Beyond, Aust. J. Chem. 63 413-429 (2010) DOI
- T. Andruniów, M. Olivucci, How Does the Relocation of Internal Water Affect Resonance Raman Spectra of Rhodopsin? An Insight from CASSCF/Amber Calculations, J. Chem. Theory Comput. 5 (11), 3096-3104 (2009) DOI
- T. Andruniów, M. Jaworska, P. Lodowski, M. Z. Zgierski, R. Dreos, L. Randaccio, P. M. Kozlowski, Time-dependent density functional theory study of cobalt corrinoids: Electronically excited states
of coenzyme B12, J. Chem. Phys 131 (10), 105105 (2009) DOI
- P. Lodowski, M. Jaworska, T. Andruniów, M. Kumar, P. M. Kozlowski, Photodissociation of Co-C bond in methyl- and ethylcobalamin: An insight from TD-DFT
calculations, J. Phys. Chem. B 113 6898-6909 (2009) DOI
- T. Andruniów, M. Jaworska, P. Lodowski, M. Z. Zgierski, R. Dreos, L. Randaccio, P. M. Kozlowski, Time-dependent denisty functional theory study of cobalt corrinoids: Electronically excited states of methylcobalamin, J. Chem. Phys. 129 085101 (2008) DOI
- B. Szefczyk, T. Andruniów, W. A. Sokalski, Ab initio multireference study of Hetero-Diels-Alder reaction of buta-1,3-diene with alkyl glyoxylates, J. Mol. Model. 14 (8), 727-733 (2008) DOI
- T. Andruniów, Vibrational Analysis of a Solvated Green Fluorescent Protein Chromophore , J. Mol. Model. 13 (6-7), 775-783 (2007) DOI
- L. M. Frutos, T. Andruniów, F. Santoro, N. Ferré, M. Olivucci, Tracking the excited-state time evolution of the visual pigment with multiconfugurational quantum chemistry, Proc. Natl. Acad. Sci. USA 104 7764-7769 (2007) DOI
- P. Lodowski, M. Jaworska, T. Andruniów, P. M. Kozlowski, Photolysis of Methylcobalamin: Identification of the Releveant Excited States Involved in Co-C Bond Scission, J. Phys. Chem. B 111 (10), 2419-2422 (2007) DOI
- F. Lumento, V. Zanirato, S. Fusi, E. Busi, L. Latterini, F. Elisei, A. Sinicropi, T. Andruniów, N. Ferre, R. Basosi, M. Olivucci, Quantum chemical modeling and preparation of a biomimetic photochemical switch, Angew. Chem. Int. Ed. 46 (3), 414-420 (2007) DOI
- P. M. Kozlowski, T. Andruniów, A. A. Jarzecki, M. Z. Zgierski, T. G. Spiro, DFT analysis of Co-alkyl and Co-adenosyl vibrational modes in B12 cofactors, Inorg. Chem. 45 (14), 5585-5590 (2006) DOI
- T. Andruniów, S. Fantacci, F. de Angelis, N. Ferré, M. Olivucci, Mechanism of the initial conformational transition of a photomodulable peptide, Angew. Chem. Int. Ed. 44 (37), 6077-6081 (2005) DOI
- A. Sinicropi, T. Andruniów, N. Ferré, R. Basosi, M. Olivucci, Properties of the emitting state of the green fluorescent protein resolved at the CASPT2//CASSCF/CHARMM level, J. Am. Chem. Soc. 127 (33), 11534-11535 (2005) DOI
- T. Andruniów, J. Kuta, M. Z. Zgierski, P. M. Kozlowski, Molecular orbital analysis of anomalous trans effect in cobalamins, Chem. Phys. Lett. 410 (4-6), 410-416 (2005) DOI
- A. Sinicropi, T. Andruniów, L. de Vico, N. Ferré, M. Olivucci, Toward a computational photobiology, Pure Appl. Chem. 77 (6), 977-993 (2005) DOI
- T. Andruniów, N. Ferré, M. Olivucci, Structure, initial excited-state relaxation, and energy storage of rhodopsin resolved at the multiconfigurational perturbation theory level, Proc. Natl. Acad. Sci. U.S.A. 101 (52), 17908-17913 (2004) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, Vibrational analysis of methylcobalamin, J. Phys. Chem. A 106 (7), 1365-1373 (2002) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, Theoretical analysis of electronic absorption spectra of vitamin B12 models, J. Chem. Phys. 115 (16), 7522-7533 (2001) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, Theoretical determination of the Co-C bond energy dissociation in cobalamins, J. Am. Chem. Soc. 123 (11), 2679-2680 (2001) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, DFT-SQM force field for cobalt corrinoids, Chem. Phys. Lett. 331 (5-6), 502-508 (2000) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, New light on the Co-C bond activation in B12-dependent enzymes from density functional theory, Chem. Phys. Lett. 331 (5-6), 509-512 (2000) DOI
- T. Andruniów, M. Z. Zgierski, P. M. Kozlowski, Density functional theory analysis of stereoelectronic properties of cobalamins, J. Phys. Chem. B 104 (46), 10921-10927 (2000) DOI
- T. Andruniów, M. Pawlikowski, Absorption and resonance Raman study of the pyromellitic diahydride anion via density functional theory, Chem. Phys. Lett. 321 (5-6), 485-490 (2000)
- T. Andruniów, M. Pawlikowski, M. Z. Zgierski, Density functional study of absorption and resonance Raman spectra of pyromellitic diahydride (PMDA) anion, J. Phys. Chem. A 104 (4), 845-851 (2000)
- T. Andruniów, M. Pawlikowski, M. Sterzel, The Franck-Condon effect in the lowest energy 12B2u state of tetracyanoquinodimethane anion. The resonance Raman studies in terms of density functional theory, Vib. Spectrosc. 21 (1-2), 45-50 (1999)
- T. Andruniów, M. Pawlikowski, Franck-Condon effects in low-energy states of C10H8+ radical. Ab initio MCSCF study of absorption and resonance Raman spectra, Chem. Phys. 236 (1-3), 25-33 (1998)
- T. Andruniów, M. Pawlikowski, Vibronic coupling effects in the low-energy 12B1g and 22B1g states of the C10H8+ radical, Chem. Phys. 236 (1-3), 35-41 (1998)
- T. Andruniów, M. Pawlikowski, On the Franck-Condon effects in the absorption spectrum of C10H8 anion. The analysis based on the ab initio MCSCF method, Acta Phys. Pol. A 93 (5-6), 707-715 (1998)
- T. Andruniów, K. Zborowski, M. Pawlikowski, Resonance Raman study of Franck-Condon effects in the C10H8+ radical. Ab initio MCSCF calculations for the low-energy 2B2g and 2B3g symmetry states, Chem. Phys. Lett. 259 (1-2), 193-198 (1996)
Tematy prac dyplomowych i badawczych (Research topics for students)
- Analiza stanów wzbudzonych w modelach witaminy B12.
- Spektroskopia B12-ryboprzełączników.
- Struktura i funkcja rybozymu typu "głowa młotka".
- Teoretyczna analiza widma absorpcyjnego chromoforu białka GFP w fazie gazowej.
- Jak osiągnąć przyspieszenie procesu fotoizomeryzacji w modelach retinalu?
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